The one-stop solution for quick and easy oligo analysis
Our multifunctional oligo property analysis tool (MOPS) is an oligo calculator inclusive a dilution calculator, a TM calculator and much more!
MOPS allows you to analyse and calculate any physical property of your DNA or RNA oligo sequence:
- Physical property check incl. TM calculator
Determines all physical properties such as GC content, melting temperature (Tm), molecular weight (MW), extinction coefficient (EC) and complement sequences
- Secondary structures
Predict the secondary structure pf DNA and RNA oligos using a mfold and RNAfold program. Mfold is an adaptation of the mfold package by Zuker and Jaeger which was modified to work with the Wisconsin Package.
- BLASTn analysis
Aligns your sequence against human, mouse and rat Refseq database entries and provides a comprehensive BLASTn report.
- Dimer formation & PCR viability check
Tests your oligo against itself or another oligo for dimer formation and performs a PCR viability check for a primer pair
- OD calculator
Calculates the optical density (OD), mass, amount and molecular weight (MW) of your oligo for specific experimental conditions. The appropriate oligo synthesis scale can also be decipered.
- Dilution calculator
Determines how much volume is needed to dilute a highly concentraged oligo stock solution to a specific lower concentration. This application also supports different units for concentration and volume.
All these analyses can be done with a single free online tool that includes a direct link to the respective oligo order menu.